Stem-loop pab-MIR397n

Accession

MI0036680

Description

Picea abies pab-MIR397n precursor miRNA

Literature search

1 open access papers mention pab-MIR397n
(2 sentences)

Sequence

gauaaaugcUCAUCAUUGAGAGCAGCAUUGacuguuggaacugaacaacaguucgacggaucgaugcugcauucaacgauaagcuuuuauu
((((((.(((.(((.(((((.((((((((((((((((.(((((.....))))))))))).)))))))))).))))).))).))).))))))

Structure

      u   C   A     A          -      g     a 
gauaaa gcU AUC UUGAG GCAGCAUUGa cuguug aacug a
|||||| ||| ||| ||||| |||||||||| |||||| ||||| c
uuauuu cga uag aacuu cgucguagcu ggcagc uugac a
      u   a   c     a          a      -     a 

Annotation confidence Not enough data

Genome context

MA_4077889: 84-174 [+]

Mature pab-miR397n

• Accession: MIMAT0044778
• Description: Picea abies pab-miR397n mature miRNA
• Sequence: 10 - UCAUCAUUGAGAGCAGCAUUG - 30
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918