Stem-loop pab-MIR397t

Accession

MI0036686

Description

Picea abies pab-MIR397t precursor miRNA

Literature search

1 open access papers mention pab-MIR397t
(2 sentences)

Sequence

cgugcagagauaaaugcUCAUCAUUGAGAGCAGCAUUGacagucugaacugaacaacaauucgaugggucgaugcugcguucaacgauaagcuuuuauuaauggcg
(((.((..((((((.(((.(((.(((((.(((((((((((.(((.(((.((.....)).))))))..))))))))))).))))).))).))).))))))..)))))

Structure

   g  ga      u   C   A     A           -a   u   c  a 
cgu ca  gauaaa gcU AUC UUGAG GCAGCAUUGac  guc gaa ug a
||| ||  |||||| ||| ||| ||||| |||||||||||  ||| ||| || c
gcg gu  uuauuu cga uag aacuu cgucguagcug  uag cuu ac a
   -  aa      u   a   c     g           gg   -   a  a 

Annotation confidence Not enough data

Genome context

MA_20374: 11422-11527 [-]

Mature pab-miR397t

• Accession: MIMAT0044784
• Description: Picea abies pab-miR397t mature miRNA
• Sequence: 18 - UCAUCAUUGAGAGCAGCAUUG - 38
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918