Accession
MI0036694
Description
Picea abies
pab-MIR399e precursor miRNA
Literature search
1 open access papers mention pab-MIR399e
(1 sentences)
(1 sentences)
Sequence
420
reads,
77.0
reads per million, 59 experiments
aguccauuccacaucUGCCAAAGGAGAGUUGCUCUGcaaaaucuccucacauugucguguucgcugcauggccgugaaaaccagcuacgacuaauuggagaaaagcgcaacgguauuuuuugcacucauuuuuguuaggguuuggauugguuuuuguuaggguuuuuuauuuguuaggguuuggauugguUUUUGUUAGGGUUUUUUUguuuguuaggguuuggauuggcu
((.(((.((((.((((..((((.(((((..((((((((((......((((...(((((((.....))))))).)))).(((((((((...(((((....(((((((.((((((.(((.((((.((((..........)))).))))..)))..))))).).)))))))....)))))....))).)))))))))).)))))).))))).))))...)))).)))).)))))
((.(((.((((.((((..((((.(((((..((((((((((......((((...(((((((.....))))))).)))).(((((((((...(((((....(((((((.((((((.(((.((((.((((..........)))).))))..)))..))))).).)))))))....)))))....))).)))))))))).)))))).))))).))))...)))).)))).)))))
Structure
u u c -GC G UU - aucuccucacauugucguguucgcugcauggccgugaa - -cga ugga g - -u -u c auuu ag cca ucca aucU CAAA GAGAG GCUCUG caaa aaccag cua cuaau gaaaagc c aacgg auu uuug acuc u || ||| |||| |||| |||| ||||| |||||| |||| |||||| ||| ||||| ||||||| | ||||| ||| |||| |||| uc ggu aggu uggg guuu UUUUU UGGGAU GUUU Uugguu ggu gauug uuuuuug g uuguu ugg aggu uggg u - u u auu g -U U -------------------------------------- a uugg uuua g a uu uu u auug
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
MA_33407: 2275-2505 [+]
Database links
Mature pab-miR399e-5p
| Accession | MIMAT0044792 |
| Description | Picea abies pab-miR399e-5p mature miRNA |
| Sequence | 16 - UGCCAAAGGAGAGUUGCUCUG - 36 |
| Evidence |
experimental
Illumina [1] |
Mature pab-miR399e-3p
| Accession | MIMAT0057538 |
| Description | Picea abies pab-miR399e-3p mature miRNA |
| Sequence | 191 - UUUUGUUAGGGUUUUUUU - 208 |
| Evidence |
experimental
unknown |
References
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