Stem-loop pab-MIR1314

Accession

MI0036703

Description

Picea abies pab-MIR1314 precursor miRNA

Sequence

72685 reads, 2343.0 reads per million, 101 experiments

uuagauggcggaagaaaUUCUUCAACAUUAGAGGCCAaaauagaaucagauucuuuuUCGGCCUCGAAUGUUAGGAGAAuguuuuccucuaccuaa
.(((.(((.((((((.(((((((((((((.((((((.(((.(((((...))))).))).)))))).)))))).))))))).)))))).))).))).

Structure

u   a   c      a       -      A      A   u     c 
 uag ugg ggaaga aUUCUUC AACAUU GAGGCC aaa agaau  
 ||| ||| |||||| ||||||| |||||| |||||| ||| ||||| a
 auc auc ccuuuu uAAGAGG UUGUAA CUCCGG Uuu ucuua  
a   c   u      g       A      G      C   u     g 

Annotation confidence High

Genome context

MA_407998: 6923-7018 [-]

Mature pab-miR1314-5p

• Accession: MIMAT0057544
• Description: Picea abies pab-miR1314-5p mature miRNA
• Sequence: 18 - UUCUUCAACAUUAGAGGCCA - 37
• Evidence: experimental ; unknown

Mature pab-miR1314-3p

• Accession: MIMAT0044801
• Description: Picea abies pab-miR1314-3p mature miRNA
• Sequence: 58 - UCGGCCUCGAAUGUUAGGAGAA - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918