Stem-loop pab-MIR1313a

Accession

MI0036704

Description

Picea abies pab-MIR1313a precursor miRNA

Literature search

1 open access papers mention pab-MIR1313a
(1 sentences)

Sequence

ugaugguauucUACCACUGAAAUUAUUGUUCGAaaugacacccgcaagucaucgagguauaccgccgugguaugguauccuuca
(((.((((((.((((((.(....(((..(((((..((((........)))))))))..)))...).)))))).)))).)).)))

Structure

   u  -    c      U AAAU   UG     aa    acc 
uga gg uauu UACCAC G    UAU  UUCGA  ugac   c
||| || |||| |||||| |    |||  |||||  ||||    
acu cc augg auggug c    aua  gagcu  acug   g
   u  u    u      c -gcc   ug     --    aac 

Annotation confidence Not enough data

Genome context

MA_497878: 5536-5619 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from pab-MIR1313a

Mature pab-miR1313a

• Accession: MIMAT0044802
• Description: Picea abies pab-miR1313a mature miRNA
• Sequence: 12 - UACCACUGAAAUUAUUGUUCGA - 33
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918