Accession
MI0036706
Description
Picea abies
pab-MIR1313c precursor miRNA
Literature search
1 open access papers mention pab-MIR1313c
(1 sentences)
(1 sentences)
Sequence
215119
reads,
5294.0
reads per million, 102 experiments
ucuuccugaugguauucUACCACUGAAAUUAUUGUUCGAaaugacaccugcagcucaucgagguauaccgccgugguaugguauccuucaaugcaucaccaaucuaaccuaguagcagggcugcaacacaugguaugauuuuggauccauugaggaauaauaaccaaguugcauggguggguuuaucCAACAAUAAUUUCAGUGGAAGacuaccgucgaucuggaaga
((((((((((((((.(((.(((((((((((((((((.((.....(((((((((((.((((.(((.....))).)))).((((((.((((((((.(((...((((..(((..((.(((....))).))....)))..))))...))).)))))))).))....))))))))))..)))))......)).))))))))))))))))).))).))))))))....))))))
((((((((((((((.(((.(((((((((((((((((.((.....(((((((((((.((((.(((.....))).)))).((((((.((((((((.(((...((((..(((..((.(((....))).))....)))..))))...))).)))))))).))....))))))))))..)))))......)).))))))))))))))))).))).))))))))....))))))
Structure
---- u A C -aauga -- caucgagguauaccgccguggua ---- c c acc ua --ua a g
ucuucc ugauggua ucU CCACUGAAAUUAUUGUU GA caccu gcagcu uggu au cuucaaug auc aauc acc gu gca g
|||||| |||||||| ||| ||||||||||||||||| || ||||| |||||| |||| || |||||||| ||| |||| ||| || |||
agaagg gcugccau aGA GGUGACUUUAAUAACAA cu guggg cguuga acca ua ggaguuac uag uuag ugg ca cgu g
ucua c A C auuugg ua ----------------------- auaa a c guu ua uaca a c
Annotation confidence
High
Do you think this miRNA is real?
Genome context
MA_91205: 17967-18194 [+]
Database links
Mature pab-miR1313c-5p
| Accession | MIMAT0044804 |
| Description | Picea abies pab-miR1313c-5p mature miRNA |
| Sequence | 18 - UACCACUGAAAUUAUUGUUCGA - 39 |
| Evidence |
experimental
Illumina [1] |
Mature pab-miR1313c-3p
| Accession | MIMAT0057545 |
| Description | Picea abies pab-miR1313c-3p mature miRNA |
| Sequence | 188 - CAACAAUAAUUUCAGUGGAAG - 208 |
| Evidence |
experimental
unknown |
References
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