Accession
MI0036707
Description
Picea abies
pab-MIR1313d precursor miRNA
Literature search
1 open access papers mention pab-MIR1313d
(1 sentences)
(1 sentences)
Sequence
214919
reads,
5272.0
reads per million, 102 experiments
ucuuccugaugguauucUACCACUGAAAUUAUUGUUCGAaaugacaccugcagcucaucgagguauaccacgagcucaucgagguauaccgccgugguaugguauccuucaaugcaucgccaaucuaaccuaguugcagggcugcaacacaugguaugauuuuggauccauugaggaauaaucaccaaguugcauggguggguuuaucCAACAAUAAUUUCAGUGGAAGacuacugucgaucuggaaga
((((((((((((((.(((.(((((((((((((((((.((.....(((((((((((...((.((((((((.(((.....))).))))))))..))((((....(((.((((((((.(((...((((..(((..((((((....))))))....)))..))))...))).)))))))).)))...))))))))))..)))))......)).))))))))))))))))).))).))))))))....))))))
((((((((((((((.(((.(((((((((((((((((.((.....(((((((((((...((.((((((((.(((.....))).))))))))..))((((....(((.((((((((.(((...((((..(((..((((((....))))))....)))..))))...))).)))))))).)))...))))))))))..)))))......)).))))))))))))))))).))).))))))))....))))))
Structure
---- u A C -aauga -- caucgagguauaccacgagcucaucgagguauaccgccg augg c c gcc ua --ua g
ucuucc ugauggua ucU CCACUGAAAUUAUUGUU GA caccu gcagcu uggu uau cuucaaug auc aauc acc guugca g
|||||| |||||||| ||| ||||||||||||||||| || ||||| |||||| |||| ||| |||||||| ||| |||| ||| ||||||
agaagg gcugucau aGA GGUGACUUUAAUAACAA cu guggg cguuga acca aua ggaguuac uag uuag ugg caacgu g
ucua c A C auuugg ua --------------------------------------- -cua a c guu ua uaca c
Annotation confidence
High
Do you think this miRNA is real?
Genome context
MA_941353: 1099-1347 [-]
Database links
Mature pab-miR1313d-5p
| Accession | MIMAT0044805 |
| Description | Picea abies pab-miR1313d-5p mature miRNA |
| Sequence | 18 - UACCACUGAAAUUAUUGUUCGA - 39 |
| Evidence |
experimental
Illumina [1] |
Mature pab-miR1313d-3p
| Accession | MIMAT0057546 |
| Description | Picea abies pab-miR1313d-3p mature miRNA |
| Sequence | 209 - CAACAAUAAUUUCAGUGGAAG - 229 |
| Evidence |
experimental
unknown |
References
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