Stem-loop pab-MIR2950b

Accession

MI0036712

Description

Picea abies pab-MIR2950b precursor miRNA

Sequence

2287 reads, 87.0 reads per million, 75 experiments

agggauggccaaggugUUCCAUCUCUUGCACACUGAGccauauuucucacuacaacuggaaaugacuUGGUGUGCAAGGUAUGGCAUAucuugccuaucucu
((((((((.((((((((.((((.((((((((((((((...((((((.((.......)))))))).)))))))))))))).)))).)))))))).))))))))

Structure

        c        U    C              cca      u  cu 
agggaugg caaggugU CCAU UCUUGCACACUGAG   uauuuc ca  a
|||||||| |||||||| |||| ||||||||||||||   |||||| ||  c
ucucuauc guucuAUA GGUA GGAACGUGUGGUuc   guaaag gu  a
        c        C    U              --a      -  ca 

Annotation confidence High

Genome context

MA_13599: 20011-20112 [-]

Mature pab-miR2950b-5p

• Accession: MIMAT0044810
• Description: Picea abies pab-miR2950b-5p mature miRNA
• Sequence: 17 - UUCCAUCUCUUGCACACUGAG - 37
• Evidence: experimental ; Illumina [1]

Mature pab-miR2950b-3p

• Accession: MIMAT0057548
• Description: Picea abies pab-miR2950b-3p mature miRNA
• Sequence: 68 - UGGUGUGCAAGGUAUGGCAUA - 88
• Evidence: experimental ; unknown

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918