Stem-loop pab-MIR3695a

Accession

MI0036715

Description

Picea abies pab-MIR3695a precursor miRNA

Sequence

4657 reads, 142.0 reads per million, 62 experiments

agugugccguucuuucuguccucaaUGUCGCCUGGCCGUCGUCUGAgcuucauuaccauuauagaaaaguuaacgcaucuaacuacacgcauuaauuuuucuaguaauggucaucaagcuccUACAACGGCCAGGCGACAUUGuggauuuaaagaguggcacgcu
(((((((((((((((..((((.(((((((((((((((((.((..((((((.((.(((((((((((((((((((.((............)).))))))))))).)))))))).)).))))))..)).))))))))))))))))).))))..)))))))))))))))

Structure

               cu    u                 C  CU      c  u        -           c  aucua 
agugugccguucuuu  gucc caaUGUCGCCUGGCCGU GU  GAgcuu au accauuau agaaaaguuaa gc     a
|||||||||||||||  |||| ||||||||||||||||| ||  |||||| || |||||||| ||||||||||| ||      
ucgcacggugagaaa  uagg GUUACAGCGGACCGGCA CA  cucgaa ua ugguaaug ucuuuuuaauu cg     c
               uu    u                 A  Uc      c  c        a           a  cacau 

Annotation confidence High

Genome context

MA_114953: 1845-2009 [-]

Mature pab-miR3695a-5p

• Accession: MIMAT0057551
• Description: Picea abies pab-miR3695a-5p mature miRNA
• Sequence: 26 - UGUCGCCUGGCCGUCGUCUGA - 46
• Evidence: experimental ; unknown

Mature pab-miR3695a-3p

• Accession: MIMAT0044813
• Description: Picea abies pab-miR3695a-3p mature miRNA
• Sequence: 123 - UACAACGGCCAGGCGACAUUG - 143
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918