Stem-loop pab-MIR3695b

Accession

MI0036716

Description

Picea abies pab-MIR3695b precursor miRNA

Sequence

4783 reads, 149.0 reads per million, 62 experiments

ccuCAAUGUCGCCUGGCCGUUGUcugaacuugauuaccauuauagaaaaguuaacgcaucuaacuagacgccuuaauuuuucuaguaauggucaucaagcuccUACAACGGCCAGGCGACAUUgcgg
((.((((((((((((((((((((..((.((((((.(((((((((((((((((((.((.(((....))).)).))))))))))).)))))))).)))))).))..)))))))))))))))))))).))

Structure

  u                    cu  a      u        -           c  a   a 
cc CAAUGUCGCCUGGCCGUUGU  ga cuugau accauuau agaaaaguuaa gc ucu a
|| ||||||||||||||||||||  || |||||| |||||||| ||||||||||| || |||  
gg gUUACAGCGGACCGGCAACA  cu gaacua ugguaaug ucuuuuuaauu cg aga c
  c                    Uc  c      c        a           c  c   u 

Annotation confidence Medium

Genome context

MA_3388: 22989-23115 [-]

Mature pab-miR3695b-5p

• Accession: MIMAT0057552
• Description: Picea abies pab-miR3695b-5p mature miRNA
• Sequence: 4 - CAAUGUCGCCUGGCCGUUGU - 23
• Evidence: experimental ; unknown

Mature pab-miR3695b-3p

• Accession: MIMAT0044814
• Description: Picea abies pab-miR3695b-3p mature miRNA
• Sequence: 104 - UACAACGGCCAGGCGACAUU - 123
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918