Stem-loop pab-MIR3695c

Accession

MI0036717

Description

Picea abies pab-MIR3695c precursor miRNA

Sequence

13064 reads, 443.0 reads per million, 78 experiments

cgugccuuucuuucagcccucacUGUCGCCUGGUCGUUGUGGGGgguugaugaucauuacuagaaaagugaaguuuucuaguaauggucaucaagcucuuacaacggccagGCGACAUUGCGGACUUAAACaacggcacg
((((((.((.(((.((.((.((.((((((((((((((((((((((.(((((((((((((((((((((......))))))))))))))))))))).)))))))))))))))))))))).)).)).)).))).)).))))))

Structure

      u  c   c  c  u  c                      g                     gu 
cgugcc uu uuu ag cc ca UGUCGCCUGGUCGUUGUGGGGg uugaugaucauuacuagaaaa  g
|||||| || ||| || || || |||||||||||||||||||||| |||||||||||||||||||||   
gcacgg aa AAA UC GG GU ACAGCGgaccggcaacauucuc aacuacugguaaugaucuuuu  a
      c  C   U  A  C  U                      g                     ga 

Annotation confidence Low

Genome context

MA_683786: 2051-2190 [-]

Mature pab-miR3695c-5p

• Accession: MIMAT0044815
• Description: Picea abies pab-miR3695c-5p mature miRNA
• Sequence: 24 - UGUCGCCUGGUCGUUGUGGGG - 44
• Evidence: experimental ; Illumina [1]

Mature pab-miR3695c-3p

• Accession: MIMAT0057553
• Description: Picea abies pab-miR3695c-3p mature miRNA
• Sequence: 112 - GCGACAUUGCGGACUUAAAC - 131
• Evidence: experimental ; unknown

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918