Stem-loop pab-MIR3697c

Accession

MI0036719

Description

Picea abies pab-MIR3697c precursor miRNA

Sequence

32222 reads, 1643.0 reads per million, 102 experiments

uaauggUAGCCCCUGACUUCAACAUGAGgaagagaagcagcuccuuuuCGUGUUGAAGUCAGGUCUAUCauug
(((((((((..(((((((((((((((((((.(((......))).))))))))))))))))))).)))))))))

Structure

         CC                   a   aa 
uaauggUAG  CCUGACUUCAACAUGAGga gag  g
|||||||||  ||||||||||||||||||| |||   
guuaCUAUC  GGACUGAAGUUGUGCuuuu cuc  c
         -U                   c   ga 

Annotation confidence High

Genome context

MA_9528013: 2263-2335 [+]

Mature pab-miR3697c-5p

• Accession: MIMAT0044817
• Description: Picea abies pab-miR3697c-5p mature miRNA
• Sequence: 7 - UAGCCCCUGACUUCAACAUGAG - 28
• Evidence: experimental ; Illumina [1]

Mature pab-miR3697c-3p

• Accession: MIMAT0057555
• Description: Picea abies pab-miR3697c-3p mature miRNA
• Sequence: 49 - CGUGUUGAAGUCAGGUCUAUC - 69
• Evidence: experimental ; unknown

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918