Stem-loop pab-MIR3710b

Accession

MI0036729

Description

Picea abies pab-MIR3710b precursor miRNA

Sequence

gcagacacucccagacucgguugggaaucugaggggccucgaaagucuugauuugcgcaggugcuccucucugcggacgcuuccagacucugUUGGGAACCUGACGGGUCUCCgaagucuugaucugggcgguugc
((((.(.(.((((((.(((((((((.(((((.(((..(((((.(((((.((..(.((((((........)))))).)....)).)))))...)))))..)))..))))).)))))....)))))))))).))))))

Structure

    a a u      c    ----     a     -a   gc     --a     u  --uu g      ugc 
gcag c c cccaga ucgg    uuggg aucug  ggg  cucga   agucu ga    u cgcagg   u
|||| | | |||||| ||||    ||||| |||||  |||  |||||   ||||| ||    | ||||||    
cguu g g gggucu aguu    agCCU UGGGC  UCC  GGGUU   ucaga cu    a gcgucu   c
    - - c      -    cuga     C     AG   AA     guc     c  ucgc g      cuc 

Annotation confidence Not enough data

Genome context

MA_73017: 15219-15354 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from pab-MIR3710b

Mature pab-miR3710b

• Accession: MIMAT0044827
• Description: Picea abies pab-miR3710b mature miRNA
• Sequence: 93 - UUGGGAACCUGACGGGUCUCC - 113
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918