Accession
MI0036729
Description
Picea abies
pab-MIR3710b precursor miRNA
Sequence
18355
reads,
1980.0
reads per million, 101 experiments
gcagacaCUCCCAGACUCGGUUGGGAAucugaggggccucgaaagucuugauuugcgcaggugcuccucucugcggacgcuuccagacucugUUGGGAACCUGACGGGUCUCCgaagucuugaucugggcgguugc
((((.(.(.((((((.(((((((((.(((((.(((..(((((.(((((.((..(.((((((........)))))).)....)).)))))...)))))..)))..))))).)))))....)))))))))).))))))
((((.(.(.((((((.(((((((((.(((((.(((..(((((.(((((.((..(.((((((........)))))).)....)).)))))...)))))..)))..))))).)))))....)))))))))).))))))
Structure
a a U C ---- A -a gc --a u --uu g ugc
gcag c C CCCAGA UCGG UUGGG Aucug ggg cucga agucu ga u cgcagg u
|||| | | |||||| |||| ||||| ||||| ||| ||||| ||||| || | ||||||
cguu g g gggucu aguu agCCU UGGGC UCC GGGUU ucaga cu a gcgucu c
- - c - cuga C AG AA guc c ucgc g cuc
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
MA_73017: 15219-15354 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from pab-MIR3710b
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature pab-miR3710b-5p
| Accession | MIMAT0057565 |
| Description | Picea abies pab-miR3710b-5p mature miRNA |
| Sequence | 8 - CUCCCAGACUCGGUUGGGAA - 27 |
| Evidence |
experimental
unknown |
Mature pab-miR3710b-3p
| Accession | MIMAT0044827 |
| Description | Picea abies pab-miR3710b-3p mature miRNA |
| Sequence | 93 - UUGGGAACCUGACGGGUCUCC - 113 |
| Evidence |
experimental
Illumina [1] |
References
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