Stem-loop pab-MIR3710g

Accession

MI0036734

Description

Picea abies pab-MIR3710g precursor miRNA

Sequence

24782 reads, 2773.0 reads per million, 102 experiments

cucccagacucggUCGGGAACCUGACGGGCCUucgaaaccucgacuugggcgggugcuccucuuugcagacgcucccagacuccgUCGGGAACCUGACGGGCCUCCaaa
.....((.((((.(((((..((((((((((((((((....))))...))))(((.((...(((....))).)).))).....))))))))..))))))))).)).....

Structure

cuccc  a    g     AA        -------------------------------    ---    a 
     ag cucg UCGGG  CCUGACGG                               GCCU   ucga a
     || |||| |||||  ||||||||                               ||||   ||||  
     UC GGGC AGUCC  GGGCUgcc                               cggg   agcu c
aaaCC  C    -     AA        ucagacccucgcagacguuucuccucguggg    uuc    c 

Annotation confidence Low

Genome context

MA_2235109: 71-179 [+]

Mature pab-miR3710g-5p

• Accession: MIMAT0057570
• Description: Picea abies pab-miR3710g-5p mature miRNA
• Sequence: 14 - UCGGGAACCUGACGGGCCU - 32
• Evidence: experimental ; unknown

Mature pab-miR3710g-3p

• Accession: MIMAT0044832
• Description: Picea abies pab-miR3710g-3p mature miRNA
• Sequence: 86 - UCGGGAACCUGACGGGCCUCC - 106
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918