Stem-loop pab-MIR11404

Accession

MI0036736

Description

Picea abies pab-MIR11404 precursor miRNA

Sequence

19362 reads, 668.0 reads per million, 97 experiments

caugguaguuugauCUUGAUCACAUUCAUCACAUUUCGUGAUAGGGAUAUACUGAAagg
.....((((...(((((.(((((..............))))).)))))..)))).....

Structure

caugg    uug     G     AUUCAU 
     uagu   auCUU AUCAC      C
     ||||   ||||| |||||       
     GUCA   UAGGG UAGUG      A
ggaAA    -UA     A     CUUUAC 

Annotation confidence High

Genome context

MA_22366: 19093-19151 [+]

Mature pab-miR11404-5p

• Accession: MIMAT0057572
• Description: Picea abies pab-miR11404-5p mature miRNA
• Sequence: 15 - CUUGAUCACAUUCAUCACAUU - 35
• Evidence: experimental ; unknown

Mature pab-miR11404-3p

• Accession: MIMAT0044834
• Description: Picea abies pab-miR11404-3p mature miRNA
• Sequence: 36 - UCGUGAUAGGGAUAUACUGAA - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918