Stem-loop pab-MIR391c

Accession

MI0036740

Description

Picea abies pab-MIR391c precursor miRNA

Sequence

2017 reads, 81.0 reads per million, 34 experiments

uuuugUGCGCAGGGGAGAUGACACUGUUuuuauauaucccaucuguucucuucucucgguuugagauguaugagggcAGUGUCUUCUCUCUGCGCAUGaaa
.(((((((((((((.(((.(((((((((((((((((((.((.(((...........)))..)).))))))))))))))))))).)))))))))))))))).

Structure

u             G   U                   c  -u   uucu 
 uuugUGCGCAGGG AGA GACACUGUUuuuauauauc ca  cug    c
 ||||||||||||| ||| ||||||||||||||||||| ||  |||    u
 aaGUACGCGUCUC UCU CUGUGAcgggaguauguag gu  ggc    u
a             -   U                   a  uu   ucuc 

Annotation confidence High

Genome context

MA_222421: 2898-2998 [-]

Mature pab-miR391c-5p

• Accession: MIMAT0044838
• Description: Picea abies pab-miR391c-5p mature miRNA
• Sequence: 6 - UGCGCAGGGGAGAUGACACUGUU - 28
• Evidence: experimental ; Illumina [1]

Mature pab-miR391c-3p

• Accession: MIMAT0057574
• Description: Picea abies pab-miR391c-3p mature miRNA
• Sequence: 78 - AGUGUCUUCUCUCUGCGCAUG - 98
• Evidence: experimental ; unknown

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918