miRBase entry: pab-MIR391g

Stem-loop pab-MIR391g


Accession
MI0036744
Description
Picea abies pab-MIR391g precursor miRNA


Sequence

3200 reads, 91.0 reads per million, 38 experiments
guguuuccUCCGCAGUUGAGAUGACACUGGccucaagaucaaucaaucagcagauguaugaggcuAGUGUCAUCUCUCUGAGGAUGaaacc
..(((((.(((.(((..(((((((((((((((((((.(((............))).).)))))))))))))))))).))).))).))))).

Structure
gu     c   G   UU                  - g   aauca 
  guuuc UCC CAG  GAGAUGACACUGGccuca a auc     a
  ||||| ||| |||  |||||||||||||||||| | |||      
  caaaG AGG GUC  CUCUACUGUGAucggagu u uag     u
-c     U   A   -U                  a g   acgac 


Annotation confidence High
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Genome context
MA_23991: 13827-13917 [+]

Database links

Mature pab-miR391g-5p

Accession MIMAT0044842
Description Picea abies pab-miR391g-5p mature miRNA
Sequence 9 - UCCGCAGUUGAGAUGACACUGG - 30
Evidence experimental
Illumina [1]

Mature pab-miR391g-3p

Accession MIMAT0057575
Description Picea abies pab-miR391g-3p mature miRNA
Sequence 66 - AGUGUCAUCUCUCUGAGGAUG - 86
Evidence experimental
unknown

References

  1. PubMed ID: 26318183
    Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
    "Xia R, Xu J, Arikit S, Meyers BC"
    "Mol Biol Evol (2015) 32:2905-2918