Stem-loop pab-MIR482t

Accession

MI0036748

Description

Picea abies pab-MIR482t precursor miRNA

Literature search

1 open access papers mention pab-MIR482t
(5 sentences)

Sequence

8499 reads, 774.0 reads per million, 96 experiments

uccuuaugggaguaguggaAAUGGGUGAAGUCGAAAGaccucuuuccagggcggUCUUUCCACUUCUACCCAUUUCcgcuauuucacuaaguga
((((((..(((((((((((((((((((((((.((((((((.(((....))).)))))))).))))).))))))))))))))))))..)))).))

Structure

  -    ug                  -     C        u   u 
uc cuua  ggaguaguggaAAUGGGU GAAGU GAAAGacc cuu c
|| ||||  |||||||||||||||||| ||||| |||||||| |||  
ag gaau  cuuuaucgcCUUUACCCA CUUCA CUUUCUgg ggg c
  u    ca                  U     C        c   a 

Annotation confidence High

Genome context

MA_51745: 5083-5176 [-]

Mature pab-miR482t-5p

• Accession: MIMAT0057579
• Description: Picea abies pab-miR482t-5p mature miRNA
• Sequence: 20 - AAUGGGUGAAGUCGAAAG - 37
• Evidence: experimental ; unknown

Mature pab-miR482t-3p

• Accession: MIMAT0044846
• Description: Picea abies pab-miR482t-3p mature miRNA
• Sequence: 55 - UCUUUCCACUUCUACCCAUUUC - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918