Stem-loop pab-MIR482f

Accession

MI0036752

Description

Picea abies pab-MIR482f precursor miRNA

Literature search

1 open access papers mention pab-MIR482f
(5 sentences)

Sequence

8464 reads, 772.0 reads per million, 96 experiments

uaguggaAAUGGGUGAAGUCGAAAGGCCucuuuccauggcggUCUUUCCACUUCUACCCAUUUCcgcua
(((((((((((((((((((.((((((((.((......)).)))))))).))))).))))))))))))))

Structure

              -     C        u  uu 
uaguggaAAUGGGU GAAGU GAAAGGCC cu  c
|||||||||||||| ||||| |||||||| ||   
aucgcCUUUACCCA CUUCA CUUUCUgg gg  c
              U     C        c  ua 

Annotation confidence High

Genome context

MA_8720720: 1547-1615 [-]

Mature pab-miR482f-5p

• Accession: MIMAT0057581
• Description: Picea abies pab-miR482f-5p mature miRNA
• Sequence: 8 - AAUGGGUGAAGUCGAAAGGCC - 28
• Evidence: experimental ; unknown

Mature pab-miR482f-3p

• Accession: MIMAT0044850
• Description: Picea abies pab-miR482f-3p mature miRNA
• Sequence: 43 - UCUUUCCACUUCUACCCAUUUC - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918