Stem-loop pab-MIR482g

Accession

MI0036753

Description

Picea abies pab-MIR482g precursor miRNA

Literature search

2 open access papers mention pab-MIR482g
(6 sentences)

Sequence

12578 reads, 1003.0 reads per million, 97 experiments

ggaguagccgaAAUGGGUAGAUUGGAAAUACCucugcccgauucuucucauggauaugguggUCUUUUCAGUUCUACCCAUUUCagcuauucc
((((((((.(((((((((((((((((((.(((...(((..((((.......))))..)))))).))))))).)))))))))))).))))))))

Structure

        c            -       U   ucu   cg    uu 
ggaguagc gaAAUGGGUAGA UUGGAAA ACC   gcc  auuc  c
|||||||| |||||||||||| ||||||| |||   |||  ||||  u
ccuuaucg CUUUACCCAUCU GACUUUU Ugg   ugg  uagg  c
        a            U       C   ---   ua    ua 

Annotation confidence High

Genome context

MA_118116: 3814-3906 [+]

Mature pab-miR482g-5p

• Accession: MIMAT0057582
• Description: Picea abies pab-miR482g-5p mature miRNA
• Sequence: 12 - AAUGGGUAGAUUGGAAAUACC - 32
• Evidence: experimental ; unknown

Mature pab-miR482g-3p

• Accession: MIMAT0044851
• Description: Picea abies pab-miR482g-3p mature miRNA
• Sequence: 63 - UCUUUUCAGUUCUACCCAUUUC - 84
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918