Stem-loop pab-MIR529b

Accession

MI0036766

Description

Picea abies pab-MIR529b precursor miRNA

Sequence

caucgcggacacccauaguAGAAGAGAGAUAGCACAACCUccaccuuuuuaauaucccuuccuuacuucuuuguagaggaauaauauuuucaggagaggguguacuaucuuucuucuucuguuggucuucagugaug
(((((((((.(((.((((.(((((((((((((.(((.((((..(((....(((((...((((((((......)).))))))..)))))...))).)))).))).))))))))))))).)))).))).))).))))))

Structure

      -   c   c    u             C   A    ca   uuuu     ccc      -  uu 
caucgc gga acc auag AGAAGAGAGAUAG ACA CCUc  ccu    aauau   uuccuu ac  c
|||||| ||| ||| |||| ||||||||||||| ||| ||||  |||    |||||   |||||| ||   
guagug cuu ugg uguc ucuucuuucuauc ugu ggag  gga    uuaua   aaggag ug  u
      a   c   u    u             a   g    -a   -cuu     -au      a  uu 

Annotation confidence Not enough data

Genome context

MA_400662: 1648-1784 [+]

Mature pab-miR529b

• Accession: MIMAT0044864
• Description: Picea abies pab-miR529b mature miRNA
• Sequence: 20 - AGAAGAGAGAUAGCACAACCU - 40
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918