Stem-loop pab-MIR529e

Accession

MI0036769

Description

Picea abies pab-MIR529e precursor miRNA

Sequence

386 reads, 31.0 reads per million, 43 experiments

aacaaaAGAAGAGAGAGAGCACAGCCUcucaugaaaauauucuuuguauauaaaacauaaaugaaggauuuucccaauccaggggcuguacucucucucuucuucuaua
.....((((((((((((((.(((((((((..((..((.(((((((((.(((.....))).))))))))).))..))....))))))))).)))))))))))))).....

Structure

aacaa              C         --ca  aa  u         a   a 
     aAGAAGAGAGAGAG ACAGCCUcu    ug  aa auucuuugu uau a
     |||||||||||||| |||||||||    ||  || ||||||||| ||| a
     uucuucucucucuc ugucgggga    ac  uu uaggaagua aua a
auauc              a         ccua  cc  u         a   c 

Annotation confidence Not enough data

Genome context

MA_12597: 9228-9336 [-]

Mature pab-miR529e-5p

• Accession: MIMAT0044867
• Description: Picea abies pab-miR529e-5p mature miRNA
• Sequence: 7 - AGAAGAGAGAGAGCACAGCCU - 27
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918