Stem-loop pab-MIR535b

Accession

MI0036782

Description

Picea abies pab-MIR535b precursor miRNA

Sequence

ggugccaucgcauugcUGACAGAGAGAGAGAGCACGCcuguauucucuuauauggauuuugcauaugugggcguacaugcgugcucucuacuuguagucagcaaacgacuguauc
(((((..(((..((((((((...((((((((((((((.(((((.(((.((((((.......)))))).))).))))).))))))))))).)))...)))))))).)))..)))))

Structure

     ca   ca        AGA   -           c     u   u      ga 
ggugc  ucg  uugcUGAC   GAG AGAGAGCACGC uguau cuc uauaug  u
|||||  |||  ||||||||   ||| ||||||||||| ||||| ||| ||||||  u
cuaug  agc  aacgacug   uuc ucucucgugcg acaug ggg guauac  u
     uc   -a        aug   a           u     c   u      gu 

Annotation confidence Not enough data

Genome context

MA_23798: 15686-15800 [+]

Mature pab-miR535b

• Accession: MIMAT0044880
• Description: Picea abies pab-miR535b mature miRNA
• Sequence: 17 - UGACAGAGAGAGAGAGCACGC - 37
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918