Stem-loop pab-MIR536b

Accession

MI0036786

Description

Picea abies pab-MIR536b precursor miRNA

Sequence

2265 reads, 94.0 reads per million, 49 experiments

ucuuuggaUGCACACUGCCUGGCACGAUUcgaacccccgacgacUCGUGCCAAGCUGUGUGCAUCucaaga
((((.((((((((((.((.((((((((.(((.........))).)))))))).)).)))))))))).))))

Structure

    u          U  C        U   aac 
ucuu ggaUGCACAC GC UGGCACGA Ucg   c
|||| |||||||||| || |||||||| |||   c
agaa uCUACGUGUG CG ACCGUGCU agc   c
    c          U  A        c   agc 

Annotation confidence High

Genome context

MA_749522: 7756-7826 [+]

Mature pab-miR536b-5p

• Accession: MIMAT0057607
• Description: Picea abies pab-miR536b-5p mature miRNA
• Sequence: 9 - UGCACACUGCCUGGCACGAUU - 29
• Evidence: experimental ; unknown

Mature pab-miR536b-3p

• Accession: MIMAT0044884
• Description: Picea abies pab-miR536b-3p mature miRNA
• Sequence: 45 - UCGUGCCAAGCUGUGUGCAUC - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918