Accession
MI0036789
Description
Picea abies
pab-MIR946c precursor miRNA
Literature search
1 open access papers mention pab-MIR946c
(4 sentences)
(4 sentences)
Sequence
294757
reads,
9098.0
reads per million, 102 experiments
aauugauguguucagauuguacagauGUGGAUAUGGAAGGGCUAGGUAacauaaaauacaaaaccaauuuaaugcagauugcacaagggccaucuuauuguagauuguugguuguuugagaucaagcaacucuguaccagcagcuguauuuagauggccaugcucauuggguugccuuuugcucuuuaCCAGCCCUUCUGCUAUCCACAUucguacuaauuuguccacaucaauu
((((((((((..((((((((((.((((((((((((((((((((.(((((..(((((..(((..(((((....((((...))))....((((((((...(((((.((((((((((((((....)))))).......)))))))))))))...))))))))......))))).)))..)))))....))))))))))))))).)))))))))).)))).))))))..))))))))))
((((((((((..((((((((((.((((((((((((((((((((.(((((..(((((..(((..(((((....((((...))))....((((((((...(((((.((((((((((((((....)))))).......)))))))))))))...))))))))......))))).)))..)))))....))))))))))))))).)))))))))).)))).))))))..))))))))))
Structure
uu - a - A --ca ua aa uuaaugcagauugcacaag uau a ------- a
aauugaugug cagauu guac gauGUGGAUA UGGAAGGGCU GGUAa uaaaa caa ccaau ggccaucu uguag uuguuggu uguuug g
|||||||||| |||||| |||| |||||||||| |||||||||| ||||| ||||| ||| ||||| |||||||| ||||| |||||||| ||||||
uuaacuacac guuuaa caug uUACACCUAU GUCUUCCCGA CCauu guuuu guu gguua ccgguaga auguc gacgacca acgaac a
cu u c C - ucuc cc -g -------------cucgua uuu - ugucuca u
Annotation confidence
Medium
Do you think this miRNA is real?
Genome context
MA_10434984: 2599-2833 [+]
Database links
Mature pab-miR946c-5p
| Accession | MIMAT0057610 |
| Description | Picea abies pab-miR946c-5p mature miRNA |
| Sequence | 27 - GUGGAUAUGGAAGGGCUAGGUA - 48 |
| Evidence |
experimental
unknown |
Mature pab-miR946c-3p
| Accession | MIMAT0044887 |
| Description | Picea abies pab-miR946c-3p mature miRNA |
| Sequence | 189 - CCAGCCCUUCUGCUAUCCACAU - 210 |
| Evidence |
experimental
Illumina [1] |
References
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