Accession
MI0036791
Description
Picea abies
pab-MIR946e precursor miRNA
Literature search
1 open access papers mention pab-MIR946e
(4 sentences)
(4 sentences)
Sequence
290132
reads,
8951.0
reads per million, 102 experiments
aauuguuguguucagaguguacagauguggauauauaaggguuaguaaacaguacaaaacccauuuaauagagauuccgugagaaacAUCUUAUUGUAGAUUGUUGgcuguuucagauccagcaagcaacaaagcagcuguauuuugaucgccauacucauuaaauggguugucuguuugcucuuuaCCAGCCCUUCUGCUAUCCACAUucguacuaguuuguccacaucaauu
(((((.((((..((((.(((((.((((((((((((.((((((((((((((((.(((..(((((((((((.(((.....((((((....))))))..........((((.(((..((((.((((..((......)).)))).)))).))).))))..)))))))))))))))))))))))))).......))))))).)).)))))))))).)))).).))))..)))).)))))
(((((.((((..((((.(((((.((((((((((((.((((((((((((((((.(((..(((((((((((.(((.....((((((....))))))..........((((.(((..((((.((((..((......)).)))).)))).))).))))..)))))))))))))))))))))))))).......))))))).)).)))))))))).)))).).))))..)))).)))))
Structure
u uu g - a - u ------- u aa a ---------------------------------------------------------auucc a
aauug ugug caga u guac gauguggaua ua aaggguu aguaaacag aca acccauuuaau gag gugaga a
||||| |||| |||| | |||| |||||||||| || ||||||| ||||||||| ||| ||||||||||| ||| ||||||
uuaac acac guuu a caug uUACACCUAU GU UUCCCGA ucguuuguc ugu uggguaaauua cuc UAUUCU c
u cu g u c C C CCauuuc - -- - auaccgcuaguuuuaugucgacgaaacaacgaacgaccuagacuuugucgGUUGUUAGAUGU A
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
MA_85105: 11372-11605 [+]
Database links
Mature pab-miR946e-5p
| Accession | MIMAT0057612 |
| Description | Picea abies pab-miR946e-5p mature miRNA |
| Sequence | 88 - AUCUUAUUGUAGAUUGUUG - 106 |
| Evidence |
experimental
unknown |
Mature pab-miR946e-3p
| Accession | MIMAT0044889 |
| Description | Picea abies pab-miR946e-3p mature miRNA |
| Sequence | 188 - CCAGCCCUUCUGCUAUCCACAU - 209 |
| Evidence |
experimental
Illumina [1] |
References
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