Stem-loop pab-MIR946g

Accession

MI0036793

Description

Picea abies pab-MIR946g precursor miRNA

Literature search

1 open access papers mention pab-MIR946g
(4 sentences)

Sequence

uacauaUGUGGAUAUAGAAGGGUUAGUuaguaaauaguacaaaacccauuuaauagagauuccaugagaggcauuuuauuauagauuguugguuguucgagaccaaaggacugucuucaagaaacugcauuuugauggucauauuaauuaaauggguugcuuguuuucucuuuaucaguccuucuacuauccacauccaua
.....(((((((((((((((((....((.(((((.((.((((((((((((((((.((....((((.(((((((.(((.....((((.(((((((......)))))....)).)))).....))).))).)))).)))).....)).))))))))))))..))))...)).))))).)))))))))).))))))))).....

Structure

uacau         -        UUAG  a     u  --u    --            a  -gauu    g    -   u   auuau    u  ----     gu 
     aUGUGGAUA UAGAAGGG    Uu guaaa ag   acaa  aacccauuuaau ga     ccau agag gca uuu     agau gu    ugguu  u
     ||||||||| ||||||||    || ||||| ||   ||||  |||||||||||| ||     |||| |||| ||| |||     |||| ||    |||||   
     uacaccuau aucuuccu    ga uauuu uc   uguu  uuggguaaauua uu     ggua uuuu cgu aaa     ucug ca    accag  c
auacc         c        ----  c     c  uuu    cg            a  auacu    g    a   c   gaacu    u  ggaa     ag 

Annotation confidence Not enough data

Genome context

MA_781091: 2438-2638 [-]

Mature pab-miR946g

• Accession: MIMAT0044891
• Description: Picea abies pab-miR946g mature miRNA
• Sequence: 7 - UGUGGAUAUAGAAGGGUUAGU - 27
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918