Stem-loop pab-MIR159g

Accession

MI0036809

Description

Picea abies pab-MIR159g precursor miRNA

Literature search

2 open access papers mention pab-MIR159g
(6 sentences)

Sequence

875 reads, 82.0 reads per million, 64 experiments

uucAACUGCUGGUUCAUGGAUUCUauuacauugucacguugcuggagcuauuuuucguggcaagauaauggUGUACAUGACACAGGAGUUGga
(((((((.(((..(((((.((.((((((..((((((((..((....)).......))))))))..)))))).)).)))))..))).)))))))

Structure

       G   GU     G  U      ca        -----uu  u 
uucAACU CUG  UCAUG AU CUauua  uugucacg       gc g
||||||| |||  ||||| || ||||||  ||||||||       ||  
agGUUGA GAC  AGUAC UG gguaau  aacggugc       cg g
       G   AC     A  U      ag        uuuuuau  a 

Annotation confidence High

Genome context

MA_10433715: 4781-4873 [+]

Mature pab-miR159g-5p

• Accession: MIMAT0044907
• Description: Picea abies pab-miR159g-5p mature miRNA
• Sequence: 4 - AACUGCUGGUUCAUGGAUUCU - 24
• Evidence: experimental ; Illumina [1]

Mature pab-miR159g-3p

• Accession: MIMAT0057628
• Description: Picea abies pab-miR159g-3p mature miRNA
• Sequence: 72 - UGUACAUGACACAGGAGUUG - 91
• Evidence: experimental ; unknown

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918