Stem-loop pab-MIR11411a

Accession

MI0036813

Description

Picea abies pab-MIR11411a precursor miRNA

Sequence

2136 reads, 185.0 reads per million, 91 experiments

gggucucuaauggAAGCCCAGAUCUGUAGAUUUCaauucuauauguacuguucaauugaauugaaaUCUGCAAAUCUGGGUUUCCCuuugagauuc
(((((((.((.((((((((((((.(((((((((((((((..................))))))))))))))).)))))))))))).)).)))))))

Structure

       u  u            C               uauaugua 
gggucuc aa ggAAGCCCAGAU UGUAGAUUUCaauuc        c
||||||| || |||||||||||| |||||||||||||||         
cuuagag uu CCUUUGGGUCUA ACGUCUaaaguuaag        u
       u  C            A               uuaacuug 

Annotation confidence Medium

Genome context

MA_19073: 17852-17947 [+]

Mature pab-miR11411a-5p

• Accession: MIMAT0044911
• Description: Picea abies pab-miR11411a-5p mature miRNA
• Sequence: 14 - AAGCCCAGAUCUGUAGAUUUC - 34
• Evidence: experimental ; Illumina [1]

Mature pab-miR11411a-3p

• Accession: MIMAT0057632
• Description: Picea abies pab-miR11411a-3p mature miRNA
• Sequence: 67 - UCUGCAAAUCUGGGUUUCCC - 86
• Evidence: experimental ; unknown

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918