Stem-loop pab-MIR11413a

Accession

MI0036815

Description

Picea abies pab-MIR11413a precursor miRNA

Sequence

847 reads, 112.0 reads per million, 74 experiments

cagggugucucagagcgGUAUCUUCCAGUUGGGAUUcuucaaucuuaacaacgacaugaagAAUCCCAAUUCGAAGAUACCGcccuuagaaauccug
((((((.(((.((.(((((((((((.(((((((((((((((.((........))..))))))))))))))).))))))))))).)).))).))))))

Structure

      g   c  a           C               -a  uua 
cagggu ucu ag gcgGUAUCUUC AGUUGGGAUUcuuca  uc   a
|||||| ||| || ||||||||||| |||||||||||||||  ||    
guccua aga uc cGCCAUAGAAG UUAACCCUAAgaagu  ag   c
      a   u  c           C               ac  caa 

Annotation confidence Medium

Genome context

MA_577159: 993-1089 [-]

Mature pab-miR11413a-5p

• Accession: MIMAT0057633
• Description: Picea abies pab-miR11413a-5p mature miRNA
• Sequence: 18 - GUAUCUUCCAGUUGGGAUU - 36
• Evidence: experimental ; unknown

Mature pab-miR11413a-3p

• Accession: MIMAT0044913
• Description: Picea abies pab-miR11413a-3p mature miRNA
• Sequence: 62 - AAUCCCAAUUCGAAGAUACCG - 82
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918