Stem-loop pab-MIR11413b

Accession

MI0036816

Description

Picea abies pab-MIR11413b precursor miRNA

Sequence

3740 reads, 397.0 reads per million, 85 experiments

cagggugucucagagcgGUAUCUUCCAGUUGGGAUUcuucaaucuuaacaacgacuugaagCAUCCCAAUUUGAAGAUACCGcccuuagaaauccug
((((((.(((.((.(((((((((((.(((((((((.((((((((........)).)))))).))))))))).))))))))))).)).))).))))))

Structure

      g   c  a           C         U      -  uua 
cagggu ucu ag gcgGUAUCUUC AGUUGGGAU cuucaa uc   a
|||||| ||| || ||||||||||| ||||||||| |||||| ||    
guccua aga uc cGCCAUAGAAG UUAACCCUA gaaguu ag   c
      a   u  c           U         C      c  caa 

Annotation confidence High

Genome context

MA_10429004: 3256-3352 [-]

Mature pab-miR11413b-5p

• Accession: MIMAT0057634
• Description: Picea abies pab-miR11413b-5p mature miRNA
• Sequence: 18 - GUAUCUUCCAGUUGGGAUU - 36
• Evidence: experimental ; unknown

Mature pab-miR11413b-3p

• Accession: MIMAT0044914
• Description: Picea abies pab-miR11413b-3p mature miRNA
• Sequence: 62 - CAUCCCAAUUUGAAGAUACCG - 82
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918