Stem-loop pab-MIR11418

Accession

MI0036822

Description

Picea abies pab-MIR11418 precursor miRNA

Sequence

accgccuccaccuacacACCCACCGCCGCUGCCGCCGCcgccuacgccgccuccauucugauggaggaguagcgaggaguagcaacugguggaggcggcggugguggguguggagguggaacugguggu
(((((((((((((.(((((((((((((((((((.(((((((((.(((..(((((((....)))))))....)))))).........)))))).))))))))))))))))))).)))))))...))))))

Structure

      ---       a                   G      ---------   a   --cg       u 
accgcc   uccaccu cacACCCACCGCCGCUGCC CCGCcg         ccu cgc    ccuccau c
||||||   ||||||| ||||||||||||||||||| ||||||         ||| |||    |||||||  
uggugg   aggugga gugugggugguggcggcgg gguggu         gga gcg    ggaggua u
      uca       g                   a      caacgauga   -   auga       g 

Annotation confidence Not enough data

Genome context

MA_10429663: 2531-2659 [+]

Mature pab-miR11418

• Accession: MIMAT0044920
• Description: Picea abies pab-miR11418 mature miRNA
• Sequence: 18 - ACCCACCGCCGCUGCCGCCGC - 38
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918