Stem-loop pab-MIR11420a

Accession

MI0036825

Description

Picea abies pab-MIR11420a precursor miRNA

Sequence

100 reads, 15.0 reads per million, 41 experiments

gacucggCUGAGUUGAUUGGUUUGGUGCUGaaucggucgagucaagccuugacucggcugguuugguACUAAACUAAUCAACUCAGCCgaguc
(((((((((((((((((((((((((((((((((((((((((((((...)))))))))))))))))))))))))))))))))))))))))))))

Structure

                                             g 
gacucggCUGAGUUGAUUGGUUUGGUGCUGaaucggucgagucaa  
||||||||||||||||||||||||||||||||||||||||||||| c
cugagCCGACUCAACUAAUCAAAUCAugguuuggucggcucaguu  
                                             c 

Annotation confidence High

Genome context

MA_212895: 6122-6214 [+]

Mature pab-miR11420a-5p

• Accession: MIMAT0057636
• Description: Picea abies pab-miR11420a-5p mature miRNA
• Sequence: 8 - CUGAGUUGAUUGGUUUGGUGCUG - 30
• Evidence: experimental ; unknown

Mature pab-miR11420a-3p

• Accession: MIMAT0044923
• Description: Picea abies pab-miR11420a-3p mature miRNA
• Sequence: 68 - ACUAAACUAAUCAACUCAGCC - 88
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918