Stem-loop pab-MIR11422b

Accession

MI0036828

Description

Picea abies pab-MIR11422b precursor miRNA

Sequence

6427 reads, 271.0 reads per million, 98 experiments

gaACUCAGUAAUGUGCUUUUGGAugaacgaauggccugauauaaguugaucUGAAGCACAUUGUUGGGUUU
(((((((((((((((((((.((((.(((..(((......)))..))).)))))))))))))))))))))))

Structure

                   U    g   ga   gc 
gaACUCAGUAAUGUGCUUU GGAu aac  aug  c
||||||||||||||||||| |||| |||  |||   
UUUGGGUUGUUACACGAAG Ucua uug  uau  u
                   -    g   aa   ag 

Annotation confidence High

Genome context

MA_10434024: 2728-2798 [+]

Mature pab-miR11422b-5p

• Accession: MIMAT0044926
• Description: Picea abies pab-miR11422b-5p mature miRNA
• Sequence: 3 - ACUCAGUAAUGUGCUUUUGGA - 23
• Evidence: experimental ; Illumina [1]

Mature pab-miR11422b-3p

• Accession: MIMAT0057639
• Description: Picea abies pab-miR11422b-3p mature miRNA
• Sequence: 52 - UGAAGCACAUUGUUGGGUUU - 71
• Evidence: experimental ; unknown

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918