Stem-loop pab-MIR11423a

Accession

MI0036829

Description

Picea abies pab-MIR11423a precursor miRNA

Sequence

223 reads, 27.0 reads per million, 46 experiments

gcgccgaaacgACUGGGAAACGUCGUCGGCCGUaucguaugauguuuccaaaucgGGAAACAUCGUAUGGUACggucaacgacguuucccagcuguuucggcgu
(((((((((((.((((((((((((((.((((((((((((((((((((((......)))))))))))))))))))))).)))))))))))))).)))))))))))

Structure

           A              C                      aa 
gcgccgaaacg CUGGGAAACGUCGU GGCCGUaucguaugauguuucc  a
||||||||||| |||||||||||||| ||||||||||||||||||||||   
ugcggcuuugu gacccuuugcagca cuggCAUGGUAUGCUACAAAGG  u
           c              a                      gc 

Annotation confidence Low

Genome context

MA_10217530: 2532-2635 [-]

Mature pab-miR11423a-5p

• Accession: MIMAT0044927
• Description: Picea abies pab-miR11423a-5p mature miRNA
• Sequence: 12 - ACUGGGAAACGUCGUCGGCCGU - 33
• Evidence: experimental ; Illumina [1]

Mature pab-miR11423a-3p

• Accession: MIMAT0057640
• Description: Picea abies pab-miR11423a-3p mature miRNA
• Sequence: 56 - GGAAACAUCGUAUGGUAC - 73
• Evidence: experimental ; unknown

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918