Stem-loop pab-MIR11424

Accession

MI0036830

Description

Picea abies pab-MIR11424 precursor miRNA

Sequence

1842 reads, 82.0 reads per million, 57 experiments

aucuaagcugcagacgaACUGUGAUUAAAUCUGGGACUcauauauccuaacauauacaaaauuaugagUCCCAGUUUUAGUCACAGAUUcgucuacggccuuagau
((((((((((.((((((((((((((((((.((((((((((((....................)))))))))))).))))))))))).))))))).))).)))))))

Structure

       -   c       -           U            uauccuaac 
aucuaag cug agacgaA CUGUGAUUAAA CUGGGACUcaua         a
||||||| ||| ||||||| ||||||||||| ||||||||||||          
uagauuc ggc ucugcUU GACACUGAUUU GACCCUgaguau         u
       c   a       A           U            uaaaacaua 

Annotation confidence High

Genome context

MA_93425: 8896-9001 [-]

Mature pab-miR11424-5p

• Accession: MIMAT0044928
• Description: Picea abies pab-miR11424-5p mature miRNA
• Sequence: 18 - ACUGUGAUUAAAUCUGGGACU - 38
• Evidence: experimental ; Illumina [1]

Mature pab-miR11424-3p

• Accession: MIMAT0057641
• Description: Picea abies pab-miR11424-3p mature miRNA
• Sequence: 69 - UCCCAGUUUUAGUCACAGAUU - 89
• Evidence: experimental ; unknown

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918