Stem-loop pab-MIR11425b

Accession

MI0036832

Description

Picea abies pab-MIR11425b precursor miRNA

Sequence

114337 reads, 2556.0 reads per million, 102 experiments

cgguaaacugcaagaAGAGAAAGUUAUAGCUGUAAUAguuaacuuguuuagaaaacaacaagagcacuUUUACAGCUAUAUCUUUUCCaucuagcucauuuacug
(((((((..((.(((.(.(((((.(((((((((((.(((...((((((........))))))...))).))))))))))).))))).).))).))...)))))))

Structure

       -cu  a   A A     U           U   uaa      uag 
cgguaaa   gc aga G GAAAG UAUAGCUGUAA Agu   cuuguu   a
|||||||   || ||| | ||||| ||||||||||| |||   ||||||    
gucauuu   cg ucu C UUUUC AUAUCGACAUU uca   gaacaa   a
       acu  a   a C     U           U   cga      caa 

Annotation confidence Low

Genome context

MA_12306: 3806-3910 [+]

Mature pab-miR11425b-5p

• Accession: MIMAT0044930
• Description: Picea abies pab-miR11425b-5p mature miRNA
• Sequence: 16 - AGAGAAAGUUAUAGCUGUAAUA - 37
• Evidence: experimental ; Illumina [1]

Mature pab-miR11425b-3p

• Accession: MIMAT0057643
• Description: Picea abies pab-miR11425b-3p mature miRNA
• Sequence: 69 - UUUACAGCUAUAUCUUUUCC - 88
• Evidence: experimental ; unknown

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918