Stem-loop pab-MIR11426a

Accession

MI0036837

Description

Picea abies pab-MIR11426a precursor miRNA

Sequence

5084 reads, 336.0 reads per million, 100 experiments

uggacauuuucguggcauAGAACUGGAGUUUGUUGACUCaaaauaguuuucagcuucuuguaggcaaaggggcaaaaaauauuuggAGUCAACAAACUCUGGUUCUAugccacgguguuca
(((((((...(((((((((((((((((((((((((((((.(((((.((((..(((((((.......)))))))..))))))))).))))))))))))))))))))))))))))))))))))

Structure

       uuu                             a     g    ca       gu 
uggacau   cguggcauAGAACUGGAGUUUGUUGACUC aaaua uuuu  gcuucuu  a
|||||||   ||||||||||||||||||||||||||||| ||||| ||||  |||||||  g
acuugug   gcaccguAUCUUGGUCUCAAACAACUGAg uuuau aaaa  cggggaa  g
       ---                             g     -    aa       ac 

Annotation confidence Medium

Genome context

MA_101653: 17684-17804 [+]

Mature pab-miR11426a-5p

• Accession: MIMAT0044935
• Description: Picea abies pab-miR11426a-5p mature miRNA
• Sequence: 19 - AGAACUGGAGUUUGUUGACUC - 39
• Evidence: experimental ; Illumina [1]

Mature pab-miR11426a-3p

• Accession: MIMAT0057648
• Description: Picea abies pab-miR11426a-3p mature miRNA
• Sequence: 87 - AGUCAACAAACUCUGGUUCUA - 107
• Evidence: experimental ; unknown

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918