Stem-loop pab-MIR11427b

Accession

MI0036840

Description

Picea abies pab-MIR11427b precursor miRNA

Sequence

ugauauucuugauccuccauuuucgcuuucgguuucauagacuuuuaccuggcccgcaguguucgcuaauaauuuagcgaacacugcacgcuauauagaaguagaugAGACCGAAGGCGAGAAUGGAGCaucaagaauauca
(((((((((((((.((((((((((((((((((((((((..(((((((..((((..((((((((((((((....))))))))))))))..))))..)))))))..)))))))))))))))))))))))).)))))))))))))

Structure

             c                        ag       cc    cc              u 
ugauauucuugau cuccauuuucgcuuucgguuucau  acuuuua  uggc  gcaguguucgcuaa a
||||||||||||| ||||||||||||||||||||||||  |||||||  ||||  ||||||||||||||  
acuauaagaacua GAGGUAAGAGCGGAAGCCAGAgua  ugaagau  aucg  cgucacaagcgauu a
             C                        ga       au    ca              u 

Annotation confidence Not enough data

Genome context

MA_9150: 22615-22756 [+]

Mature pab-miR11427b

• Accession: MIMAT0044938
• Description: Picea abies pab-miR11427b mature miRNA
• Sequence: 108 - AGACCGAAGGCGAGAAUGGAGC - 129
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918