Stem-loop pab-MIR11429a

Accession

MI0036842

Description

Picea abies pab-MIR11429a precursor miRNA

Sequence

11463 reads, 386.0 reads per million, 62 experiments

cauggauggaaacaagAGCAGCAUGACACCAAGGGCaacuguuaagauggugcugcaaugaagaacuguuguugCCCUUGGUGUCAUGCAGCUCCcuguuucuauucaug
((((((((((((((.((((.(((((((((((((((((((......((((((.((.......)).))))))))))))))))))))))))).))))..))))))))))))))

Structure

              -a    A                   uguuaa      g  gc 
cauggauggaaaca  gAGC GCAUGACACCAAGGGCaac      gauggu cu  a
||||||||||||||  |||| |||||||||||||||||||      |||||| ||  a
guacuuaucuuugu  CUCG CGUACUGUGGUUCCCguug      uuguca ga  u
              cC    A                   ------      a  ag 

Annotation confidence High

Genome context

MA_521826: 1779-1888 [-]

Mature pab-miR11429a-5p

• Accession: MIMAT0044940
• Description: Picea abies pab-miR11429a-5p mature miRNA
• Sequence: 17 - AGCAGCAUGACACCAAGGGC - 36
• Evidence: experimental ; Illumina [1]

Mature pab-miR11429a-3p

• Accession: MIMAT0057652
• Description: Picea abies pab-miR11429a-3p mature miRNA
• Sequence: 75 - CCCUUGGUGUCAUGCAGCUCC - 95
• Evidence: experimental ; unknown

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918