Stem-loop pab-MIR11429d

Accession

MI0036845

Description

Picea abies pab-MIR11429d precursor miRNA

Sequence

10021 reads, 384.0 reads per million, 61 experiments

gcauggauagguacauggAGCAGCAUGACACCAAGGGCaacuauuaugaugcuucugcaaagaaguaggguuucguugCCCUUUGUGUCAUGCAGCUCCuuguuucuauucaugu
(((((((((((.(((.(((((.(((((((((.(((((((((....((..(((((((....)))))))..))...))))))))).))))))))).))))).))).)))))))))))

Structure

           u   u     A         C         uauu  ga       g 
gcauggauagg aca ggAGC GCAUGACAC AAGGGCaac    au  ugcuucu c
||||||||||| ||| ||||| ||||||||| |||||||||    ||  |||||||  
uguacuuaucu ugu CCUCG CGUACUGUG UUCCCguug    ug  augaaga a
           u   u     A         U         -cuu  gg       a 

Annotation confidence High

Genome context

MA_10435496: 3450-3564 [+]

Mature pab-miR11429d-5p

• Accession: MIMAT0044943
• Description: Picea abies pab-miR11429d-5p mature miRNA
• Sequence: 19 - AGCAGCAUGACACCAAGGGC - 38
• Evidence: experimental ; Illumina [1]

Mature pab-miR11429d-3p

• Accession: MIMAT0057655
• Description: Picea abies pab-miR11429d-3p mature miRNA
• Sequence: 79 - CCCUUUGUGUCAUGCAGCUCC - 99
• Evidence: experimental ; unknown

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918