Stem-loop pab-MIR11432

Accession

MI0036848

Description

Picea abies pab-MIR11432 precursor miRNA

Sequence

1285 reads, 115.0 reads per million, 15 experiments

uggugucgaaugcccacCCUGGUUGGUAUUCCACCUCGagcgagcguuggcacuggcauuaguaaaauuacauucaggaugccaugugaggugAGGUGGAACACCAACCAGUGUaggcauuggaagcca
((((.((.((((((.((.(((((((((.(((((((((.(.(..((((.((((((((...((((...))))...))))..))))))))..).)))))))))).))))))))).)).)))))).)).))))

Structure

    g  g      c  C         A         G g ga    u    --    cau    a 
uggu uc aaugcc ac CUGGUUGGU UUCCACCUC a c  gcgu ggca  cugg   uagu  
|||| || |||||| || ||||||||| ||||||||| | |  |||| ||||  ||||   |||| a
accg ag uuacgg UG GACCAACCA AAGGUGGAg u g  ugua ccgu  gacu   auua  
    a  g      a  U         C         - g ag    -    ag    uac    a 

Annotation confidence High

Genome context

MA_28316: 46072-46200 [+]

Mature pab-miR11432-5p

• Accession: MIMAT0057657
• Description: Picea abies pab-miR11432-5p mature miRNA
• Sequence: 18 - CCUGGUUGGUAUUCCACCUCG - 38
• Evidence: experimental ; unknown

Mature pab-miR11432-3p

• Accession: MIMAT0044946
• Description: Picea abies pab-miR11432-3p mature miRNA
• Sequence: 94 - AGGUGGAACACCAACCAGUGU - 114
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918