Stem-loop pab-MIR3693k

Accession

MI0036853

Description

Picea abies pab-MIR3693k precursor miRNA

Sequence

ugagcgugcucaggaacuacuuAUAGAUGGGAUGUUGCUCGUUuaugggcgcuuguaaauucaacaaauggaucugcucgaguguuugaauaaggacuaugaugagcagccccccaucuaugaacaguucaugagcaccuacg
..((.(((((((.(((((..(((((((((((..((((((((((.(((((((((((((.(((((.....))))).)))..))))))...........))))))))))))))..)))))))))))..))))).)))))))))...

Structure

-ug  c       g     ac           AU          u    -----------      --   a     a 
   ag gugcuca gaacu  uuAUAGAUGGG  GUUGCUCGUU augg           gcgcuu  gua auuca c
   || ||||||| |||||  |||||||||||  |||||||||| ||||           ||||||  ||| ||||| a
   uc cacgagu cuuga  aguaucuaccc  cgacgaguag uauc           ugugag  cgu uaggu a
gca  -       a     ca           cc          -    aggaauaaguu      cu   c     a 

Annotation confidence Not enough data

Genome context

MA_78562: 5958-6100 [+]

Mature pab-miR3693k

• Accession: MIMAT0044951
• Description: Picea abies pab-miR3693k mature miRNA
• Sequence: 23 - AUAGAUGGGAUGUUGCUCGUU - 43
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918