Stem-loop pab-MIR11409c

Accession

MI0036855

Description

Picea abies pab-MIR11409c precursor miRNA

Sequence

uccaucuuaacccuggaucuaucaagagucgagaggggucaaaucucuugaggugaaaaccuuuacgugaggaaagguuaaaaguuugcaccucaagAUAUUUGAUCCCUCUUGGCGCuugauagauccaagguuaagaugga
((((((((((((.(((((((((((((.(((((((((((((((((.((((((((((..((((((..(....)..)))))).........)))))))))).))))))))))))))))).))))))))))))).))))))))))))

Structure

            c             a                 c          -------aa      ua g 
uccaucuuaacc uggaucuaucaag gucgagaggggucaaau ucuugaggug         aaccuu  c u
|||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||         ||||||  |  
agguagaauugg accuagauaguuC CGGUUCUCCCUAGUUUA Agaacuccac         uuggaa  g g
            a             G                 U          guuugaaaa      ag a 

Annotation confidence Not enough data

Genome context

MA_305778: 299-441 [-]

Mature pab-miR11409c

• Accession: MIMAT0044953
• Description: Picea abies pab-miR11409c mature miRNA
• Sequence: 98 - AUAUUUGAUCCCUCUUGGCGC - 118
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918