Stem-loop pab-MIR11436a

Accession

MI0036857

Description

Picea abies pab-MIR11436a precursor miRNA

Sequence

1098 reads, 151.0 reads per million, 42 experiments

uucucugcaAUCCUUUUGAAAGCUUGGCCAugucaauguuugaucauccccaucauuggcaugGACAAGCUCUCAAAAGGAUUGuagagaa
.((((((((((((((((((.((((((.(((((((((((..((........)).))))))))))).)))))).)))))))))))))))))).

Structure

u                  A      G           uu  auc 
 ucucugcaAUCCUUUUGA AGCUUG CCAugucaaug  ug   a
 |||||||||||||||||| |||||| |||||||||||  ||    
 agagauGUUAGGAAAACU UCGAAC Gguacgguuac  ac   u
a                  C      A           -u  ccc 

Annotation confidence High

Genome context

MA_45323: 14887-14977 [+]

Mature pab-miR11436a-5p

• Accession: MIMAT0044955
• Description: Picea abies pab-miR11436a-5p mature miRNA
• Sequence: 10 - AUCCUUUUGAAAGCUUGGCCA - 30
• Evidence: experimental ; Illumina [1]

Mature pab-miR11436a-3p

• Accession: MIMAT0057664
• Description: Picea abies pab-miR11436a-3p mature miRNA
• Sequence: 64 - GACAAGCUCUCAAAAGGAUUG - 84
• Evidence: experimental ; unknown

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918