Stem-loop pab-MIR11436c

Accession

MI0036859

Description

Picea abies pab-MIR11436c precursor miRNA

Sequence

920 reads, 150.0 reads per million, 43 experiments

ucucugcaAUCCUUUUGAAAGCUUGGCCAugucaaugucugaucauccccaucauuugcauggccaaGCUCUCAAAAGGAUUGUAGaga
((((((((((((((((((.(((((((((((((.((((..((........)).)))).))))))))))))).))))))))))))))))))

Structure

                  A             c    uc  auc 
ucucugcaAUCCUUUUGA AGCUUGGCCAugu aaug  ug   a
|||||||||||||||||| ||||||||||||| ||||  ||    
agaGAUGUUAGGAAAACU UCGaaccgguacg uuac  ac   u
                  C             u    -u  ccc 

Annotation confidence Medium

Genome context

MA_8451: 17580-17668 [-]

Mature pab-miR11436c-5p

• Accession: MIMAT0044957
• Description: Picea abies pab-miR11436c-5p mature miRNA
• Sequence: 9 - AUCCUUUUGAAAGCUUGGCCA - 29
• Evidence: experimental ; Illumina [1]

Mature pab-miR11436c-3p

• Accession: MIMAT0057666
• Description: Picea abies pab-miR11436c-3p mature miRNA
• Sequence: 68 - GCUCUCAAAAGGAUUGUAG - 86
• Evidence: experimental ; unknown

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918