Stem-loop pab-MIR11437

Accession

MI0036861

Description

Picea abies pab-MIR11437 precursor miRNA

Sequence

141 reads, 45.0 reads per million, 51 experiments

gcagcuagcuAUCUAAUAUCAAUGUCGGCCUuugccucucccccuuuuacgagaaaagauaaggGGUUGUUUGUCAGGCCUGCCCUugacaguagaaggcccugc
((((...(((.((((...((((.((.(((((......(..((((((..............))))))..)......))))).))..))))...)))).))).))))

Structure

    cua   A    AUA    -U  C     uugccu uc      uuacga 
gcag   gcu UCUA   UCAA  GU GGCCU      c  ccccuu      g
||||   ||| ||||   ||||  || |||||      |  ||||||       
cguc   cgg agau   aguU  CG CCGGA      G  GGggaa      a
    --c   a    gac    CC  U     CUGUUU UU      uagaaa 

Annotation confidence Low

Genome context

MA_10183120: 1923-2027 [-]

Mature pab-miR11437-5p

• Accession: MIMAT0044959
• Description: Picea abies pab-miR11437-5p mature miRNA
• Sequence: 11 - AUCUAAUAUCAAUGUCGGCCU - 31
• Evidence: experimental ; Illumina [1]

Mature pab-miR11437-3p

• Accession: MIMAT0057667
• Description: Picea abies pab-miR11437-3p mature miRNA
• Sequence: 65 - GGUUGUUUGUCAGGCCUGCCCU - 86
• Evidence: experimental ; unknown

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918