Stem-loop pab-MIR11440b

Accession

MI0036865

Description

Picea abies pab-MIR11440b precursor miRNA

Sequence

136 reads, 17.0 reads per million, 48 experiments

cuaagauuuuggaauuugauugguaAUGUCGUGGAUGUAGGGGAGAgaaauuugaacucaaguaggaggauugauaggaguaguggaaggaggauuuuugguuaaauuucucuacccuacaucuacgacauuacugaucaaauuucccaaaucuuag
(((((((((.((((((((((((((((((((((((((((((((.((((((((((((.(((......)))......(((((((..(......)..))))))).)))))))))))).)))))))))))))))))))))))))))).)))).)))))))))

Structure

         u    -                            G            acucaaguaggaggauuga       ag gg 
cuaagauuu ggaa uuugauugguaAUGUCGUGGAUGUAGGG AGAgaaauuuga                   uaggagu  u  a
||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||                   |||||||  |   
gauucuaaa ccuu aaacuagucauuacagcaucuacauccc ucucuuuaaauu                   guuuuua  a  a
         c    u                            a            ------------------g       gg gg 

Annotation confidence Not enough data

Genome context

MA_175011: 8408-8564 [-]

Mature pab-miR11440b-5p

• Accession: MIMAT0044963
• Description: Picea abies pab-miR11440b-5p mature miRNA
• Sequence: 26 - AUGUCGUGGAUGUAGGGGAGA - 46
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918