Accession
MI0036866
Description
Picea abies
pab-MIR11441a precursor miRNA
Sequence
1918
reads,
174.0
reads per million, 90 experiments
ugggaagagagauugcagacgcuucAUUGCCGCGUCGUCUUUGGCGuccgacagaaaaaauugaugauuugcugcagcaaucauggguaaguacugaaucauucaaagcucuagaaaauaaaaaaauauuuuacaaaaaucuguguacaauuuuugaauucuucaucguucaggUAAUAAACGAAGUGCGCGGgauuagaaugcuugaucacacggauagugauagugaugaugacagcucccca
((((....(((.(((((..(((((((((((((.((.(((...(((((.(..........(((.((((((.((....)))))))).))).(((..((((...))))..)))....((((((......))))))........((((((((......((((...))))(((((.........))))).)))))))).....).))))).))).)).))).)))))).))))....)).))))))))))
((((....(((.(((((..(((((((((((((.((.(((...(((((.(..........(((.((((((.((....)))))))).))).(((..((((...))))..)))....((((((......))))))........((((((((......((((...))))(((((.........))))).)))))))).....).))))).))).)).))).)))))).))))....)).))))))))))
Structure
aaga a - --ga - - C C UUU c gacagaaaaaauugaugauuugcugcagcaaucauggguaaguacugaaucauucaaagcucuagaaaauaaaaaaauauuuuacaaaaau aauuuuugaauucuuca cag
uggg gag uug ca cgcu ucAUUG CCG GU GUC GGCGu c cuguguac ucguu g
|||| ||| ||| || |||| |||||| ||| || ||| ||||| | |||||||| ||||| U
accc cuc gac gu guga agugau ggc ca uag ucgua g GGCGCGUG AGCAA A
---- - a agua u a a c --u a --------------------------------------------------------------------------------------auuag ----------------A AUA
Annotation confidence
Medium
Do you think this miRNA is real?
Genome context
MA_6920157: 259-503 [+]
Database links
Mature pab-miR11441a-5p
| Accession | MIMAT0044964 |
| Description | Picea abies pab-miR11441a-5p mature miRNA |
| Sequence | 26 - AUUGCCGCGUCGUCUUUGGCG - 46 |
| Evidence |
experimental
Illumina [1] |
Mature pab-miR11441a-3p
| Accession | MIMAT0057669 |
| Description | Picea abies pab-miR11441a-3p mature miRNA |
| Sequence | 175 - UAAUAAACGAAGUGCGCGG - 193 |
| Evidence |
experimental
unknown |
References
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