Stem-loop pab-MIR11443

Accession

MI0036869

Description

Picea abies pab-MIR11443 precursor miRNA

Sequence

agaucuuaacguuucagguAUUUGAGAGUUGGAAUGGGCAGaggagaggaaggaaggaaugaaagggucguuauucugaucuuuccaaaauccccuuccaauuccaaucccaaaucccugaaacaauguuaagaugu
..((((((((((((((((.(((((.(.((((((((.((.((.(((..(((((((.(((((((........)))))))..)))))))....))).)).)).)))))))).)))))).))))))))...))))))))..

Structure

ag        ---        u     A A        G  C  a   --ga       -a       aag 
  aucuuaac   guuucagg AUUUG G GUUGGAAU GG AG gga    ggaagga  ggaauga   g
  ||||||||   |||||||| ||||| | |||||||| || || |||    |||||||  |||||||    
  uagaauug   caaagucc uaaac c uaaccuua cc uc ccu    ccuuucu  ucuuauu   g
ug        uaa        c     - c        a  u  c   aaaa       ag       gcu 

Annotation confidence Not enough data

Genome context

MA_455978: 7266-7402 [+]

Mature pab-miR11443

• Accession: MIMAT0044967
• Description: Picea abies pab-miR11443 mature miRNA
• Sequence: 20 - AUUUGAGAGUUGGAAUGGGCAG - 41
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918